rs52070154 SNP Detail

Summary

• ID
  rs52070154
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:29302134 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCCAAGTG CTGGGATTAA
  AGGCGTGTAC CACCACTGCC CAGCTCAAAG TATTATCTTA GTAAAGTAAC TGGCTTGGTT
  CTATTTTAGT TTCAGTTGGC CTTTCATAGA CCAGGCTGGC CTCCAACTGG TGACAATCCT
  TCTGCCTCTG CTGCCCAAGA GCCAGGGTCA ACAGGCATGT GCTGCCACAC CTGGCTCTTC
  G
  TTTTCTTTTC TTTTTTTTTT TTTTTTTTTT TTTTTGGTTT TTCGAGACAG GGTTTCTCTG
  TGTAGCCCTG GCTGTCCTGG AACTCACTTT GTAGACCAGG CTGGCCTCGA ACTCAGAGAT
  CCACCTGCCT CTGCCTCCCG AGTGCTGGGA TTAAAGGCGA GCGCCACCAC GCCCGACCTA
  GTTCTTCATT TTAGACAGGA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss145426501	ENSMUSSNP4690915	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs52070154					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:29302134 () rs orientation: forward

Symbol	Name	Function Class
Rr370203	regulatory region 370203	977 bp downstream
Rr524789	regulatory region 524789	626 bp distal
Rr524790	regulatory region 524790	1107 bp proximal
Tssr143493	transcription start site region 143493	1573 bp downstream