rs52076713 SNP Detail

Summary

• ID
  rs52076713
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:27934200 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C AAAGTGACAG ATGCTGGAGC AGGCAAGGGA CTTAACAAAC
  CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT TCTTTCTCTC TCTCTCTCTC
  R
  TCTTTCTCTC TCTTTCTTTC TCTCTCATCT TTCTCTCTCC CCCTCTCTCT GTTTCTCTCT
  CTTTCTTCCT CTCTTTTTCT CTCTTTGTCT TTCTCTCTCG T                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss145418900	ENSMUSSNP6099870	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs52076713					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:27934200 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8855	CpG island 8855	1787 bp proximal
Spdef	SAM pointed domain containing ets transcription factor	within coordinates