rs52082586 SNP Detail

Summary

• ID
  rs52082586
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:25670945 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GCAGAGGCAG AGGCAGAGGC AGAGGCAGAG GCAGAGGCAG
  AGGCAGAGGC AGAGGCAGAG GCAGAGGCAG AGGCAGAGGC AGAGGCAGAG GCAGAGGCAG
  A
  GGCAGAGGCA GAGGCAGAGG CAGAGGCAGG CATGACTAGG GTCTCTTCTC CACAAGAACC
  CAGGTCCTAG TGGGGCTCAG CTCTTATTAT CATATGGTAG G                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss145389243	ENSMUSSNP7248554	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs52082586					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:25670945 () rs orientation: forward

Symbol	Name	Function Class
Gm63608	predicted gene, 63608	within coordinates
Rr523576	regulatory region 523576	within coordinates
Tssr143159	transcription start site region 143159	1748 bp upstream