rs52083671 SNP Detail

Summary

• ID
  rs52083671
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146788788 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GTCATACTGT CAAGAACACT CTGAGTAGGT AATCATCATC
  TTTCAACGAT GGCAAATATA TTTGTATGTG TTGAAAAACA AACAAACAAA CAAACAAACA
  C
  ACAAACACAC ACACACACAG ACAGCACGGA CTAGAGATCA GTTGGAACGT AGATGTGCTT
  CAGCTATCAG GATAGGAAGT TTATTATTTT TCACTGCTTG T                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss136047078	ENSMUSSNP6348703	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs52083671					SNP	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146788788 () rs orientation: forward

Symbol	Name	Function Class
Rr587119	regulatory region 587119	116 bp distal
Rr587120	regulatory region 587120	348 bp proximal
Rr587121	regulatory region 587121	1976 bp proximal