rs52085437 SNP Detail

Summary

• ID
  rs52085437
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:96861301 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCAAA GCCTTTTTCC TTTCTTTATA
  A
  CTTTCCTTGT AATAGTCATT TTACT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss145435512	ENSMUSSNP1024861	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss322339868	CHEV_7_104360604	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs52085437					SNP	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:96861301 () rs orientation: forward

Symbol	Name	Function Class
Gab2	growth factor receptor bound protein 2-associated protein 2	within coordinates
Tssr67956	transcription start site region 67956	1871 bp downstream
Tssr67957	transcription start site region 67957	1767 bp downstream
Tssr67958	transcription start site region 67958	648 bp downstream
Tssr67959	transcription start site region 67959	581 bp downstream
Tssr73571	transcription start site region 73571	918 bp upstream
Tssr73572	transcription start site region 73572	813 bp upstream