rs52086309 SNP Detail

Summary

• ID
  rs52086309
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:91908572 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATAA CCTAAAAAGG AAAGAGAAAA
  G
  GAGAGGAAGG GAAGGATGGA GAGAG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss147299199	ENSMUSSNP5992415	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss323389589	CHEV_10_91535455	CHEVERUD	SCREENING_POP	f	SNP		G	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs52086309					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:91908572 () rs orientation: forward

Symbol	Name	Function Class
Gm55043	predicted gene, 55043	895 bp upstream
Mir135a-2	microRNA 135a-2	525 bp upstream
Tssr98922	transcription start site region 98922	606 bp upstream
Tssr98923	transcription start site region 98923	680 bp downstream