rs52096846 SNP Detail

Summary

• ID
  rs52096846
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:48032658 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAGTGATTG ACACTCCAGA CCCAGCTTGA TCTTCATAAA
  AACTCATGTG TGTGTGTGTG ATTTTAAATG AAACAAATGA AACTCAGAAT TTATAATTCT
  K
  TTTTGTTTTG TTTTGTTTTT CGAGACAGGG TTTCTCTGTG TAGCCCTGGC TGTCCTGGAA
  CTCACTTTGT AGACCAGGCT GGCCTCGAAC TCAGAAATC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145708707	ENSMUSSNP6193124	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
ss325406492	CHEV_17_47858682	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs52096846					SNP	T	G	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:48032658 () rs orientation: forward

Symbol	Name	Function Class
D17Dcr12	DNA Segment, Chr 17, Derry C. Roopenian 12	855 bp proximal
D17Mit66	DNA segment, Chr 17, Massachusetts Institute of Technology 66	842 bp proximal
Gm65768	predicted gene, 65768	1940 bp upstream