rs52098833 SNP Detail

Summary

• ID
  rs52098833
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149412532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GGTGTTGGGA ACTAAACCGG GGTCCCTCTC TGCTCTTGTA
  ACTATCTCTT TGGCCCTGTT TTATCTATCT ATCTATCATC TATCTATCTA TCTATCTATC
  G
  ATCTATCTAT CTATCTATCT ATCTATCTAT CTATCTATCT ATCTATCTAT CTATCCATTC
  ATCCATCCAT CCACATACAC ATATATATAC ATGTGTGTGT A                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss148031296	ENSMUSSNP3163836	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs52098833					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149412532 () rs orientation: forward

Symbol	Name	Function Class
Rr604890	regulatory region 604890	1935 bp distal
Rr604891	regulatory region 604891	439 bp distal
Ube4b	ubiquitination factor E4B	341 bp downstream