rs52104506 SNP Detail

Summary

• ID
  rs52104506
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:113203174 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTAA AAAGTGAGGA GTGTGTGTGC
  A
  CATGTGTGAA TGCCTTTCAG CAGTG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss136987622	ENSMUSSNP973485	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss323200226	CHEV_9_113283224	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs52104506					SNP	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:113203174 () rs orientation: forward

Symbol	Name	Function Class
D9Dcr123	DNA segment, Chr 9, Derry C. Roopenian 123	within coordinates
D9Mit243	DNA segment, Chr 9, Massachusetts Institute of Technology 243	within coordinates
D9Mit243.2	DNA segment, Chr 9, Massachusetts Institute of Technology 243.2	51 bp proximal