rs52111081 SNP Detail

Summary

• ID
  rs52111081
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:83078439 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGAGGTTGT ATTCAATGAT
  TTGTGTAATC ACTCCCTCTT GAGGCCCTTA GTCATACCCG CAAATCCTTT TTGTTGTATA
  GAGCAACACA CCTGTGATTT TGTGGATTAC AGCAGGGACA ACTTGAGAGT CCTTATTCTG
  TCTATCACAA TTAGAAGTAG ACTCTAGGGC TTTCAGAAAA TGTATTTAAA GGGGGCATCA
  Y
  CTGGGGAGAA TATCCTTTGC CTGTCTTTCT TTTCCTCTCT CTTCTGCCTC TTCCCTTCTT
  TCCCTCCTTC CTTCCTTCCT TTTCCTCCAG GAAGTGACCT TGAGGATGGA AGCCAACCAC
  TGGCTGATGA AAGAGGAGCA CTGAGGTGGA GCACTGAGGT GGAGCACTGA GGTGGAGCAC
  CTTAATGACC CATCCAGCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss137926468	ENSMUSSNP4199890	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs52111081					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:83078439 () rs orientation: forward

Symbol	Name	Function Class
Rgs6	regulator of G-protein signaling 6	within coordinates
Rr261712	regulatory region 261712	1362 bp proximal
Rr268571	regulatory region 268571	439 bp distal