rs52113818 SNP Detail

Summary

• ID
  rs52113818
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:76724671 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GAGGATTGAA CTAAGGTTTT CAGCAAGCTG AACCATCTCT
  CAGCACCTCA ACAATATATA TATTTATATA AATATATATA TATATATATA TATATATATA
  Y
  ATACACACAC ACACACACAC ACACACGCAC ACACACCTTT TTTTTCAATT AAAAAAGGGC
  AAGGTAAATA AGGGCAAGCT GTTTAACAGC CATAGTGAAT G                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss137907705	ENSMUSSNP5897342	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs52113818					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76724671 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4784	CpG island 4784	1224 bp distal
Gm60317	predicted gene, 60317	1267 bp downstream
Rr468229	regulatory region 468229	1199 bp distal
Rr468230	regulatory region 468230	545 bp distal
Sptb	spectrin beta, erythrocytic	within coordinates
Tssr113983	transcription start site region 113983	1596 bp downstream