rs52114762 SNP Detail

Summary

• ID
  rs52114762
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:83079123 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAGGCAGG AGGATTTCTG
  AGTTTGAGGC CAGCCTGGTC TACAGAGTGA GTTCCAGGAC AGCCAAGGCT ACACAGAGAA
  ACCTTGTCTT GAAAAAACAA AAACAAAAAC AAAAAAAAAA AAACAAAATA AATGAATGAA
  CAAAGGAAAG AAAGAAGAAA AACGAAAACT GGCCAGTGGT TTTGTCTTGT ATTGATCAGC
  Y
  ACCAGCCTTT ACCTAGACCC TCACAATTCA TCTAGCTTCT ACCACTGTGT CAGAGCTCGA
  TCTGATTCCA CCATGACACC CCCAGAAGAA TCAAGCCAGA CAGAACGGGC TCCTTGATAA
  ATCAAGCTCT AGTCTCAATT AGTTCAAAAT GGTACTATAT GTTGACTTCC ATCCTATCCA
  TACATTATCT ACACATAGGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss61658587	NES17605787	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs52114762					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61658587	NES17605787	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:83079123 () rs orientation: forward

Symbol	Name	Function Class
Rgs6	regulator of G-protein signaling 6	within coordinates
Rr261712	regulatory region 261712	678 bp proximal
Rr268571	regulatory region 268571	1123 bp distal