rs52116850 SNP Detail

Summary

• ID
  rs52116850
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:78479480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAGATGGTC AGGATTCAGT CTCAGTGGCT
  AAGAAAGAAA GACAATGAGG AAGTAGGGTA GCTGGGTGAG GGGTTGGATA TCATCATTCC
  CAGCACCCAG GAATCAGGGG CAGTGGTGTC Tcaacaacaa caacaacaac agcaacaaca
  R
  caacaacaac aacaacaaca acaacaacaa caacaacCAA CCAACCAAAA ACCAAGTGCA
  AAAACAAAGC CAAACAAAGC CAGAGCAGGA AGCAGTGAGA GGAAGGACCA AGGGCTGAAA
  ACAGGAAAGC GGACAATGGG TCCGGGAGCT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136668627	ENSMUSSNP5228893	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
ss323016666	CHEV_9_78420005	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs52116850					SNP	A	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:78479480 () rs orientation: forward

Symbol	Name	Function Class
Slc17a5	solute carrier family 17 (anion/sugar transporter), member 5	within coordinates