rs52125447 SNP Detail

Summary

• ID
  rs52125447
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:52030710 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCACATATGT AGCAGATATG
  CAACTCTGTC TTCATGTGGG TCCCCCAACA ACTGGATCAC AGGCTGTCCC TAAAGCTGTT
  GCCTGCCTGT GGATCCCATT TCCCTAACTG GGCTGTCTTG TCTAGCCTCA GTAGGAGGGG
  ATGTGCCTAG CCCCACAGAG CCTTGATGTG CCAGGATAGG GGGATACCCA GGGGGGCCTC
  C
  ACCCTCTCAG AGGAGAAGGG GATGGGGGAT GGGGAGGCCA GGAGGCAGGG ATGACAGTAA
  ATAGAATGTA AAGTGAATAA ATAAATCAAT GGGGGGGGGT GTGTGTGTCT TGAAATATAC
  TTTGCTGGCC TTGCAGATTA CTGAAGAGAC ATCTAGTGTT TCTTCTTTTG TAAGTTGACA
  TCTTCCCTTC ATATTTTTTA                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss137728970	ENSMUSSNP1328635	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs52125447					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:52030710 () rs orientation: forward

Symbol	Name	Function Class
Rr387211	regulatory region 387211	within coordinates