rs52130207 SNP Detail

Summary

• ID
  rs52130207
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:44847637 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGCCACCT GCTGTCTACA
  TACACCTCCA AGTTCCAAAC AAATACATAT TTTATTTTAT ACCCATTGCA TATTTCTGAG
  ACTGCAATAG TAAGAAAAAA AACCACACAG GGTTTCAAGT TAAAATTGAA TGACTTGAAA
  ATCATCCTAG AGTTTTTGTT GTTGTTTATT CATTTTGTTT TGTTTTGTTT GCTTGTTCCA
  R
  TGTGTGGATT ATTTTAATGT GTGGATTTAG AGGTCATTTC TCCCCCCACC TTGTGATTTA
  TTTATTTTTG TTTACAAATC AAATTTGTTT TTTGACAATT TTGTTTATAA TTACTTTCAG
  GTACATCCAC TTTTATCTCC TTCCCCTTCT GGTCAGCCTA TACTTTGCCC TAGTTCCTGA
  TGGTGGGCAG TGAATGCAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss63503041	NES17011321	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs52130207					SNP	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63503041	NES17011321	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:44847637 () rs orientation: forward

Symbol	Name	Function Class
Rr390687	regulatory region 390687	1327 bp downstream