rs52131522 SNP Detail

Summary

• ID
  rs52131522
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:121396744 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A CACACACACA CACACACACA CACACACACA CATACACCTA
  CACACACCTA CACACACACA CACACACACA CAAACCTACA CACACACACA CACACACACC
  Y
  ACACACACAC ACACACACAC ACACACACAC ACACACACAC CCCACCCCCA CCTCATGTCA
  GCTCACTCCC TAAGCAGGCG TTAAGTGTTC ACGTGCACAC A                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147637082	ENSMUSSNP3689220	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52131522					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:121396744 () rs orientation: forward

Symbol	Name	Function Class
Gm68077	predicted gene, 68077	within coordinates
Tbk1	TANK-binding kinase 1	within coordinates