rs52140148 SNP Detail

Summary

• ID
  rs52140148
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:141016565 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    agtgaattc cctgacagcc agggccaaaa
  gagagaccct gtcttcaaac aagcaaCAGC AGCACCCCTg aaagaaagaa aaaaagaaag
  aaagaaagaa agaaagaaag aaagaaagaa agaaagaaag aaagaaagaa agaaagaaag
  R
  aagaaagaaa gTCTTTTATT CTCTTCATTC CAATCTGTGC TCGGGGAAGA GTAAAGTAAC
  CAATATTTAA ATGTGTTCCT TGCTATTCTA TTATGGTTTT CCTGTGCATA AACTTGCTAA
  TTTGTAACCA GGGAGGCTTG AGAAACTAAT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	LG/J	SM/J
ss147699430	ENSMUSSNP5770329	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320529849	CHEV_2_141000381	CHEVERUD	SCREENING_POP	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J	LG/J	SM/J
rs52140148					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:141016565 () rs orientation: forward

Symbol	Name	Function Class
2900060K15Rik	RIKEN cDNA 2900060K15 gene	425 bp upstream
Macrod2	mono-ADP ribosylhydrolase 2	within coordinates