AAATG TAATTCAGAG AGAGAGAGCG M GAGAGAGAGA GCAAGCGAGA GAGAG M = A/C Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
DBA/2J |
---|---|---|---|---|---|---|---|
ss148550139 | ENSMUSSNP4941940 | ENSEMBL | ENSEMBL_Sanger | f | SNP | C | A |
SNP Consensus Information | |||||||
SNP | Consensus Type | A/J |
DBA/2J |
||||
rs52149695 | SNP | C | A |
Location: Chr16:90878401 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm60345 | predicted gene, 60345 | within coordinates | ||||||
Rr319589 | regulatory region 319589 | within coordinates | ||||||
Rr322310 | regulatory region 322310 | 199 bp proximal | ||||||
Rr322311 | regulatory region 322311 | 1800 bp proximal | ||||||
Rr404954 | regulatory region 404954 | within coordinates | ||||||
Tssr139335 | transcription start site region 139335 | 1425 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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