rs52151521 SNP Detail

Summary

• ID
  rs52151521
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:83078508 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGTTGTAT AGAGCAACAC
  ACCTGTGATT TTGTGGATTA CAGCAGGGAC AACTTGAGAG TCCTTATTCT GTCTATCACA
  ATTAGAAGTA GACTCTAGGG CTTTCAGAAA ATGTATTTAA AGGGGGCATC ATCTGGGGAG
  AATATCCTTT GCCTGTCTTT CTTTTCCTCT CTCTTCTGCC TCTTCCCTTC TTTCCCTCCT
  Y
  CCTTCCTTCC TTTTCCTCCA GGAAGTGACC TTGAGGATGG AAGCCAACCA CTGGCTGATG
  AAAGAGGAGC ACTGAGGTGG AGCACTGAGG TGGAGCACTG AGGTGGAGCA CCTTAATGAC
  CCATCCAGCC CGCTCCAGAC TTTGTTTACC AAATACATAT GAATCTTGTT TAATCCACTG
  CTAACTTTTG CTGTCGTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss137926471	ENSMUSSNP585367	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs52151521					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:83078508 () rs orientation: forward

Symbol	Name	Function Class
Rgs6	regulator of G-protein signaling 6	within coordinates
Rr261712	regulatory region 261712	1293 bp proximal
Rr268571	regulatory region 268571	508 bp distal