rs52161472 SNP Detail

Summary

• ID
  rs52161472
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122798327 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AATGACTTAT CACAAATGCC AAAGTTGTGT TGTTACTTCA
  GAACTTGTAA GTAAAATTAA TAAATATAAA ATATAACTTA AAATACATTT TAAATTATTC
  W
  TAGTCTCTAC AATGATTATA TGTATAAACA CAATATTTTG ATATTACTTC TAAGGAGTAT
  TTTTTATTAA CTAAATTATT TTTCATGGGG CGTGGTGGT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135754490	ENSMUSSNP13188	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A	T
ss320916468	CHEV_3_122707596	CHEVERUD	SCREENING_POP	f	SNP				A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs52161472					SNP	T	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122798327 () rs orientation: forward

Symbol	Name	Function Class
Myoz2	myozenin 2	1528 bp downstream