rs52164537 SNP Detail

Summary

• ID
  rs52164537
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:149757976 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A TTAGTCTAAG TCACCTATAA TCTTCAAATA TATATTTATT
  CAAGTTATTA ATTTCATTTT AAATTTTTCT CCTTCCTCCT CCTGTCTTCT GCCCCACCCC
  A
  CCCCCCCCAT TCTGTGAATG TGTGTGCATG TGTGAATGTG TTTATGTATT TGTGTGTGTT
  TGTTTGTTAT TGCTGAGGTT GGTTGAAGCC AGAAGATGGC A                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss136077761	ENSMUSSNP4433331	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs52164537					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:149757976 () rs orientation: forward

Symbol	Name	Function Class
Rr587358	regulatory region 587358	1624 bp distal