rs52168127 SNP Detail

Summary

• ID
  rs52168127
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:84587452 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A CTTTGAGGCA CCGGGAGGCC GGCCAAGTGT TGTGTGATGG
  CCTGAGACTA GTTCATGTTT TTACTGAGCC CTGTGTGTTT GCGTGCCTGT GTATGTGTGT
  R
  TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGAGAGAG
  AGACTTGTTA CTCTTGCCAG CCCCCGTCAC TGCCTCAAGT C                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss148254578	ENSMUSSNP2741091	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs52168127					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:84587452 () rs orientation: forward

Symbol	Name	Function Class
Prr5	proline rich 5 (renal)	within coordinates
Rr304870	regulatory region 304870	852 bp distal
Rr304871	regulatory region 304871	349 bp proximal
Rr314877	regulatory region 314877	653 bp distal
Rr404546	regulatory region 404546	910 bp downstream