rs52170323 SNP Detail

Summary

• ID
  rs52170323
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:73045758 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A CTTGGGAGAC AGAGGCAGGC GGATTTCTGA GTTGGAGGCC
  AGCCTGAGTT CCAGGACAGC CAGGGCTATA CAGAGAAACC CTGTCTTGAA AAAAAAAAAA
  A
  AAAAAAAAAA AAAAAGAAAA AAGAAAAAAA AGAAAAAAAA GGAAAAAAAA ACCTTTCTCA
  GTTTGTAAGA CAGAATGGGG AGATGGATAA TTATTGAGGA C                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss134205930	ENSMUSSNP2628268	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52170323					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:73045758 () rs orientation: forward

Symbol	Name	Function Class
Rr4620	regulatory region 4620	1243 bp proximal
Rr10016	regulatory region 10016	558 bp distal
Rr10766	regulatory region 10766	1482 bp proximal
Rr395209	regulatory region 395209	915 bp downstream