rs52187340 SNP Detail

Summary

• ID
  rs52187340
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:25171699 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCTTTTCTT TTCTTTTCTT TTCTTTTCTT TTCTTTTCCC
  TCTTCTTTTC TTTTCTTTTC TTTTCTTTTC TTTTCTTTTC TTTTTCCTTT CCTTTCCTTT
  Y
  CTTTTCTTTT CTTTTCTTTT TTGAGACAGG GTTTCTTTGT GTAGCCCTGG CTGTCCTGGA
  ACTCACTTTG TAGACCAGGC TGTCCTCGAA CTCAGAAAT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146377588	ENSMUSSNP3335284	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52187340					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:25171699 () rs orientation: forward

Symbol	Name	Function Class
Anapc2	anaphase promoting complex subunit 2	within coordinates
Gm75663	predicted gene, 75663	within coordinates