rs52187382 SNP Detail

Summary

• ID
  rs52187382
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:49780830 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G CTTTTGTTGG TGTTTCTATT AGGATTACAA AGGACTTTGG
  GAAGTGATCT GTATGACTGA ACCACCACAC AGGAGCACAC ACACACACAC ACACGCACAC
  A
  CACGTGCACG CACGTGCACG CACACGCACA CGCACACACG CACACGCACG CACGCACGCA
  TGCACGCACG CACACACTCA CACACACGCA CGTGCACGCA C                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss148409967	ENSMUSSNP3345760	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52187382					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:49780830 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15849	CpG island 15849	within coordinates
Gm71615	predicted gene, 71615	within coordinates