rs52191819 SNP Detail

Summary

• ID
  rs52191819
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:56901781 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GCAAGAAAGC CTGTAGACTT GTGTTTCTCT CCAGAACCCA
  CATGAGGATG GAATGAAGAA GTGGCTCCAC AAAGCTGTCT TGTGGCCTCA CACATATTAT
  R
  GACACACCCA CAATAATAAT ATTTACTACT ACTACCACTA CCACCACCAC CACTACTACT
  ACTACTACTA CTAATAATAA TAATAATAAT TATTATTATT A                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss139588927	ENSMUSSNP6538040	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs52191819					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:56901781 () rs orientation: forward

Symbol	Name	Function Class
Btf3-ps18	basic transcription factor 3, pseudogene 18	1397 bp downstream
Gm62612	predicted gene, 62612	1126 bp downstream