rs52192415 SNP Detail

Summary

• ID
  rs52192415
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:3623360 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGATGTTCA GGTAGGATTG
  TGGTGCTGGT TCAAGGCTGT GAGTTCCCTG TGACACCATC TGAATTTCCT CTGCCTTCTA
  TCAAAGACCG CCAGGCTGGA TGTCATAGAC CACTGAGGTG TGACAGAAGG GATTTTTGAG
  CCACCCTAGC CTGGGTTTTA TAGTCCCAGC CACTTTTATC TTGTTTTAAA ATTCTAGCTA
  G
  TAATTCATTC TGAGTCAAGA TCTCTACCAG CCATCATTTC CTCTTTTCTT CTTCCCTCCC
  CTCCCTTCCT CACCCCTCTT CCCCTTCCTT CTTCTCCACC ATCATTTCTT CCTCTTTTTA
  ATTCCTTCCT TCCTTCCTTC CTTCCTTCCT TCCTTCCTTC CTTCCTTCTT TCCTCTTTTC
  CTTCCTCCCA TAGAGGGTTT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss146262536	ENSMUSSNP2813200	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs52192415					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:3623360 () rs orientation: forward

Symbol	Name	Function Class
Gm50615	predicted gene, 50615	Intron
Gm75735	predicted gene, 75735	1525 bp upstream
Rr550923	regulatory region 550923	1219 bp proximal