rs52195851 SNP Detail

Summary

• ID
  rs52195851
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:89510194 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGATGGATA GATAGATAGA
  CAGACAGAAT GTTTAGACAG ATAGATCTAT CTCTGTTATC CCTAAAAAAA AAAAAAGACA
  AGAGCTAAAA AGCTATCTGA CTCAAAGTTC TAAGAATATC CTGAAGCACT ATGGGGTAAG
  AAGCAACAGA TAGAACTTCA AAGTCAAATC AATGCCCAAT TTGAAAAAAG AATTAAAAAG
  M
  TAAATGAAAG TTTTTCAAAA CGTATAATCA TTCTTCTACT TAAAAGTGTG CAGTGGTGGG
  GTGAGAAAGA TGTTCCAGCA AGGCATCTGC TGCCAAGTCC AATGGCCTAA GTGCCACAGG
  GTGGGAAGAA TCAATTCTTA CAAACTGTCC TCTGACTTCC ACACATGTGT GTGCATGCAC
  ACACACGGAC ACAAATTAAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147258252	ENSMUSSNP6145124	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs52195851					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:89510194 () rs orientation: forward

Symbol	Name	Function Class
Scyl2	SCY1-like 2 (S. cerevisiae)	within coordinates
Tssr98887	transcription start site region 98887	137 bp upstream