rs52197151 SNP Detail

Summary

• ID
  rs52197151
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:47445966 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A GTTCTCAAAT TGAATTCAAG ACTTAGATTG GACTGCTCAA
  ATAGAAAAAA AAAACAGAAA AAAAAACCAA AAAAAAAAAC AAAAACAACA ACAACAACAA
  C
  AACAAAACAT GCCTGGTAAT GGAAACCTAC TGAACTTACA GTGGGCAAGT GAGGTCCATA
  GACCTTGGGG AAGAATATAT AACTGCCTTT AATCAGACAG A                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss146510171	ENSMUSSNP5886322	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52197151					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:47445966 () rs orientation: forward

Symbol	Name	Function Class
D2Ucl22	DNA segment, Chr 2, University College London 22	890 bp proximal