rs52209409 SNP Detail

Summary

• ID
  rs52209409
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:118894305 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAGAA AACAAACAGG CAAATAAAAA
  K
  AAAAAACACA ATAATGAAAC AAAAT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss145455107	ENSMUSSNP3059225	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss324552151	CHEV_13_119546576	CHEVERUD	SCREENING_POP	f	SNP		G	T
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs52209409					SNP	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:118894305 () rs orientation: forward

Symbol	Name	Function Class
Fgf10	fibroblast growth factor 10	within coordinates
Rr366762	regulatory region 366762	1178 bp upstream