rs52211007 SNP Detail

Summary

• ID
  rs52211007
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8856969 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTACAAAG TGACAGAAAT
  TAAACTTGTA TGGTATTGAC TTAAGATTAG ACTTAGTGGG GATAATGAGA TAGCTTATCT
  GGTTAAAGAG CTTGCTGCTA AGCCTGGCAA CTTAGGCTCA ACCCCTGGGA ACCTCTAGGT
  GTAAGGAGAG CACCAACAAA TTGTTCTCTG ATATTGCACT CACACTATGG TACACACACA
  Y
  ACGCACACAC ACACACATAC ACATGTACAC ACAAACATAC ACTCACATAT GCATATACAC
  ACATATACAT ACGTACATAC AAACACACAC ATATACACAC TTATACACAC ATACACACAT
  ACACCTCCTA CACACATATA GACACATTTA TATACACATA CACACAGACA TATAGATAAA
  CACACACTTA TACACACATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146769112	ENSMUSSNP4445345	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52211007					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8856969 () rs orientation: forward

Symbol	Name	Function Class
Rr223851	regulatory region 223851	1632 bp proximal