rs52214468 SNP Detail

Summary

• ID
  rs52214468
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:73045759 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTGGGAGACA GAGGCAGGCG GATTTCTGAG TTGGAGGCCA
  GCCTGAGTTC CAGGACAGCC AGGGCTATAC AGAGAAACCC TGTCTTGAAA AAAAAAAAAC
  C
  AAAAAAAAAA AAAAGAAAAA AGAAAAAAAA GAAAAAAAAG GAAAAAAAAA CCTTTCTCAG
  TTTGTAAGAC AGAATGGGGA GATGGATAAT TATTGAGGA                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss134205933	ENSMUSSNP2126637	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs52214468					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:73045759 () rs orientation: forward

Symbol	Name	Function Class
Rr4620	regulatory region 4620	1242 bp proximal
Rr10016	regulatory region 10016	559 bp distal
Rr10766	regulatory region 10766	1481 bp proximal
Rr395209	regulatory region 395209	916 bp downstream