rs52215248 SNP Detail

Summary

• ID
  rs52215248
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:69936220 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGATCTCTG TTCCTAGATT
  TGGTCCTACA TGCTGACCCA GTGGGCCACA AGCACAACTC AGCTCTTGTC TAACAAACTA
  GCAAGACCAG AGGTAGAGCA GAGAGGGGGG TCAGCACCTA ATGTGGCAGT GAGATGATTT
  GGGAGATGAT TAAACCACCC ATTGGTGTTC TGCCCCTTTC AGTGGACATG TAGGTTTTTT
  K
  TTTTTTTTTT TATTGTGACT TATTTACTTT ACATCTCAAT TGCAGCTTTC CCTCCCTCTT
  CTCTTTCAAG TCCTTCCTTT TCTTTCCCCT CTCCCACCAC TTGCCCTCCC TCCACTCCTT
  TTTAGAAAAG GGGAGGCCTT CCATGGATAT CAACCAGTCC TGGCATCACC AAATTGAGGT
  GAGACTGGGC TAGGCAAGGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss144577395	ENSMUSSNP1937999	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs52215248					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:69936220 () rs orientation: forward

Symbol	Name	Function Class
Gm60947	predicted gene, 60947	within coordinates