rs52226474 SNP Detail

Summary

• ID
  rs52226474
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:9129428 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CGAGGCAGAA TCTGACGGTT CTCGCAGCTT CATGCTTAGA
  TTTTGGATAG GCAGTGATTT CATTTTCAAA CATGGGGCAC ATTTGTGTTC AAGTGCATAA
  T
  TGTGTGTGTG GTATATGTGT GATATGTACG TGTGTACCAG TGTGTATGTA TGAATGTGTG
  CTGTATTTGT TGATATCATG TACACGTGCA TGCAGGTGT                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146772968	ENSMUSSNP6116529	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
ss323247149	CHEV_10_8973482	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs52226474					SNP	T	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:9129428 () rs orientation: forward

Symbol	Name	Function Class
Gm67478	predicted gene, 67478	within coordinates
Rr220895	regulatory region 220895	within coordinates
Rr384122	regulatory region 384122	454 bp downstream