rs52228582 SNP Detail

Summary

• ID
  rs52228582
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:147026651 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAAGGCAAG TTGTATCCCT
  CCTGTATAAT GTCCCTAGCT GCTCCTGCTC AGAATATGGG GGTCAGGCAG CAGATAGAAC
  CTCAGGCAGC TCTGAAACTC AGTGAGGGTG AATGTAGGCT TTCCTTGGGA CTGCCACAGC
  CCTGGCTGGA GGGCCTCAGC ATCACCCTTG CCTCTGCCTC CTGGGCACTC TGACCTCTGA
  G
  CACTCTGACC TCTGGACACT CTGACCTCTG GACACTCTAA CCTCTGAGCA CTCTGACCTC
  TGGACACTCT GACCTCAGGA CACTCTGACC TCTGAGCACT CAGACCTCTG GACACTCTGA
  CCTCTGGGCA CTCTGACCTC TGAATCATCT CCTTTCTCCA TGTCAGTCGG GTTTACATCT
  GAGTGCTTTT TCTCATCCTG                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss134009503	ENSMUSSNP5657344	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs52228582					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:147026651 () rs orientation: forward

Symbol	Name	Function Class
Gm68111	predicted gene, 68111	707 bp downstream