rs52229097 SNP Detail

Summary

• ID
  rs52229097
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:119355489 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAG AGAGAGAGAG AGAGAGAGAG
  A
  TCTTTAAATA CCATTATCCC ATGGA                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147334681	ENSMUSSNP1831832	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs52229097					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119355489 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr64	DNA Segment, Chr 2, Derry C. Roopenian 64	within coordinates
D2Mit395	DNA segment, Chr 2, Massachusetts Institute of Technology 395	within coordinates
Exd1	exonuclease 3'-5' domain containing 1	Intron
Rr563524	regulatory region 563524	403 bp proximal