rs52248992 SNP Detail

Summary

• ID
  rs52248992
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:132761932 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCAAGCATAA TAAATATAAA TAATATAAAA TACAACAAAT
  TATAGATATA ACAATTATAT TATTAACAAT TTGGAATGGG TGAGGCCAGT TTGCTCTCAG
  K
  CACTTATATT TTTAAAAAAG TTCTGGTTTG TTGACAGATG ATTGAGAACA GAAAAGTGTA
  TCATTTCCAA TGTACTGAAT TTTGTGTTTT GAAAAATTC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss133739941	ENSMUSSNP2501803	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
ss321968762	CHEV_6_132734987	CHEVERUD	SCREENING_POP	f	SNP			T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs52248992					SNP	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:132761932 () rs orientation: forward

Symbol	Name	Function Class
Tas2r145-ps3	taste receptor, type 2, member 145, pseudogene 3	1765 bp upstream