rs52249284 SNP Detail

Summary

• ID
  rs52249284
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:50962124 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTCA TTGATTTTTA AAGAAAGATT
  G
  ATTAATTTGT TTGTTTGTTT GTTTG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss146549283	ENSMUSSNP6814682	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss320293373	CHEV_2_50927632	CHEVERUD	SCREENING_POP	f	SNP		G	G
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs52249284					SNP	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:50962124 () rs orientation: forward

Symbol	Name	Function Class
Gm32360	predicted gene, 32360	873 bp downstream
Rr556806	regulatory region 556806	351 bp proximal
Rr556807	regulatory region 556807	1017 bp proximal