rs52250009 SNP Detail

Summary

• ID
  rs52250009
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:119500546 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGT GTGGAGCTCC CGCCCTCTAC
  Y
  GCACCAAAAG GCTTTGTGTG TGTGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145469328	ENSMUSSNP888800	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
ss324555677	CHEV_13_120152817	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs52250009					SNP	T	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:119500546 () rs orientation: forward

Symbol	Name	Function Class
Nnt	nicotinamide nucleotide transhydrogenase	within coordinates