rs52255207 SNP Detail

Summary

• ID
  rs52255207
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:3624637 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TGATCACGCC AATAAAAATA ACTTCAAGGT ATGCGAGCAT
  GCACACACAC ACATACACAC ACACACACAC ACACACACAC ACACACACAC ACACACACAC
  M
  CCTCAGCATC TCTGACAGTT TTGCACCCTA AGCCTTTTTC AGCAATGTTG CGACCAGTTA
  GGTAACTCAT TAAACCTTAG ATCCTGTGCC AATGATCTTA G                    
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146262558	ENSMUSSNP6961657	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs52255207					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:3624637 () rs orientation: forward

Symbol	Name	Function Class
Gm50615	predicted gene, 50615	Intron
Rr550923	regulatory region 550923	within coordinates