rs52257264 SNP Detail

Summary

• ID
  rs52257264
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:138908264 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCT TCTACCTTTT CAATCCCCTA
  Y
  TACTATATAA GAGAGCAAAA AGGAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss145584898	ENSMUSSNP6607863	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss320001826	CHEV_1_140877103	CHEVERUD	SCREENING_POP	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs52257264					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:138908264 () rs orientation: forward

Symbol	Name	Function Class
4930596I21Rik	RIKEN cDNA 4930596I21 gene	1280 bp downstream
Dennd1b	DENN domain containing 1B	within coordinates
Gm71084	predicted gene, 71084	within coordinates
Rr419798	regulatory region 419798	1549 bp proximal