rs52269782 SNP Detail

Summary

• ID
  rs52269782
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:21797251 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGGACCTAA AGGGATCTGC
  CACTGTATAG GTGGAACAAC AATATGAACT AACCAGTACT CCCCCGGAGC TTGTGTCTCT
  AGCTGCATGT GTATTAGAAG ATGGCCTAGT CGGCCATCAG AGGAAAGAGA GGCCCTTGGT
  CATGCAAACT TTATATGCCT CAGTACAGGG GAACGCCAGG GCCAAGAAAT GGGAGAGGGT
  R
  GGGGAGCGTG TGGGGTACTT TTGGGATAGC ATTGGAAATG TAAATGAAAT AAATACCTAA
  TAAAAAAAGT GAAAAAAATA GAAAATTCTC TGGGAATCAA GTATCCAATG ACAAAGGCAT
  GCTACTTGGA GGTGGTAAAA GTTATGATGC AGTAAAATGG GATGGTGATA TCATGACTCA
  GACCCAAAGC ACAAGTTACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146353844	ENSMUSSNP5759319	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52269782					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:21797251 () rs orientation: forward

Symbol	Name	Function Class
Gpr158	G protein-coupled receptor 158	within coordinates
Rr372895	regulatory region 372895	234 bp upstream