rs52275332 SNP Detail

Summary

• ID
  rs52275332
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24030247 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCTA CCTCTGGTTC AGGAAGTGAA
  K
  GCCCTTTTTA TCAAACCTAA AGACC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325327494	CHEV_17_23948240	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs52275332					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24030247 () rs orientation: forward

Symbol	Name	Function Class
Gm49911	predicted gene, 49911	1941 bp downstream
Srrm2	serine/arginine repetitive matrix 2	within coordinates
Tssr142962	transcription start site region 142962	1091 bp upstream
Tssr142963	transcription start site region 142963	1227 bp upstream
Tssr146669	transcription start site region 146669	1220 bp upstream