rs52284128 SNP Detail

Summary

• ID
  rs52284128
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:98946892 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTCAGGTT TCAAAGGTAC
  TTTATTTCTT TATTTTTTTC TTCAGTCTGC TGTACTTTAA TGAGTCCACG ATTCTTTGAC
  TTGGCATTCA CTTATGAGGT TTTTTTTGTT TTGTTTTGTT TTGTTTTCTG TTTTTTGTTT
  TTGGGTTTTG TTTTGTTTTG TTGTTTTTTG TTTTTCCAAG ACAGGGTTTC TCTGTGTAGC
  T
  CTGGCTGTTC TGGAACTCAC TCTGTAGACC AGGCTGGCCT CAAACTCAGA AATCCACCTG
  CCTCTGCCTC CTGAGTGCTG GGATTGAAGG CATGAGCCAC CACGCCCGGC AAGACCTAGT
  ATTTTTATTG ATGAGTATCT TGCTCTATAT CTGGGCAGAT ACTGAGCTAT TCTAACCCAA
  CTATGCTGGC CTGGCCTACT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss148463842	ENSMUSSNP3573258	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs52284128					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:98946892 () rs orientation: forward

Symbol	Name	Function Class
D15Jcs28	DNA segment, Chr 15, John C. Schimenti 28	892 bp distal
Gm41399	predicted gene, 41399	within coordinates
Rr305848	regulatory region 305848	309 bp proximal
Rr311358	regulatory region 311358	1659 bp distal
Rr315589	regulatory region 315589	309 bp proximal