rs52288347 SNP Detail

Summary

• ID
  rs52288347
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:99098354 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGTACTCA GAACATTGAA
  ATGTACAGGA AGTGGTGTCT AGACAAGAAA ATAGAATACA AGAGACATAA AGGAGCAAAT
  GGGGAAATGG AGGAGCAATA ATTGAGGAGT GAGGAAGGGT TTTTACTATT TGGAGAAGTA
  TGTTTATTGA TTTTGGTTGT GTGTCTTTGC TGTTGTTTAC TTCCACACTG GGATTTGCAC
  R
  TCAGCAATTT GTTGTTTGTT TGTTTTTTGT TTTTGTTTGT TTTGTTGTTT TGTTTCTGTT
  CTTGTTGTGC AAGGCAAATT TCTTCTTTCT GCAGGTGGGT TTGCAAAGCT CTAGGGCCAA
  TTTCGTAGCA GTGTTAGGTT ATGCATACCT CTGCTTCTTT GATGTTTTAG AAGACAGCTT
  CCATCTCAGA TGCTTTATAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss60654330	NES16257426	PERLEGEN	MM_PANEL2	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs52288347					SNP	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60654330	NES16257426	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:99098354 () rs orientation: forward

Symbol	Name	Function Class
Rr382525	regulatory region 382525	989 bp upstream
Rr668405	regulatory region 668405	1362 bp proximal