rs52293349 SNP Detail

Summary

• ID
  rs52293349
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:76475269 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCTGATAC TTCTGATAAT
  ACACATTAAT TTGTATTTAC GTTAATTAAG ATAGGATTAA TTTTAATAAT ATTTTGAATA
  ATACATGTAA TCATTCTTTA GATAAATTAA TTTAATACTT ATTTTCTTTT AAAATATAAT
  GAGGGATGAA TCATGGTTTC ATTTTTATCC ATTTTATTTT AACATATCTG TGATATTTTT
  G
  AATATAGTAA TGTATTTACC TTTAAAAACA CTATTATGGC TTCATTCCAT ATTAATTTTT
  TTAAATTTTA GCTTAATAAT TTGTATTTGA CAAGAAAATC TGCAAGATTT AATTTTTAAA
  CCTATGAGTT ATAAATTTAA CATTTTAAGT TTGCTGTGTA ATATTTGGCA AGAATAATAT
  CTATGCTTCT TGGTCAAATT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss135341136	ENSMUSSNP5414639	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs52293349					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:76475269 () rs orientation: forward

Symbol	Name	Function Class
Fstl5	follistatin-like 5	Intron
Rr578399	regulatory region 578399	420 bp distal