rs52293941 SNP Detail

Summary

• ID
  rs52293941
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:120953724 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTTT CCTTTCTCTT TATTTTTCAT
  Y
  CTCTTTTTCT TCTTTCTGTT CCAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147379948	ENSMUSSNP6989219	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss320481929	CHEV_2_120948979	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs52293941					SNP	C	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:120953724 () rs orientation: forward

Symbol	Name	Function Class
D2Ertd616e	DNA segment, Chr 2, ERATO Doi 616, expressed	1734 bp distal