rs52294743 SNP Detail

Summary

• ID
  rs52294743
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84132373 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTCCACCAC GAAGGTCCTG
  AGGTTAGAAC CTAGATTGTT AGGTCGGGTA CAAACACCCT GCCTGAAGAG TATTTGGACC
  CAGAACCAAT AGACATGGAA AGGGTTGGCT TTTTAGATTG GCTCCCTTGT CAAGCAATCA
  CATTTCCTAT GTCATTATTT TTTAAAGATT TATTTATCAC ACACACACAC ACACACACAC
  G
  CACACACACA CTCACACATA CACTGTAACT TTCTTCAGAC ACACCAGAAG AGGACATCAG
  ATCCCATTAC AGATGGTTGC AAGCCACTAT GTGGTTGCAA GGGAATTGAA CTCGGGACCT
  CTGGAAGAGC AGTCAGTGCT CTTAACCACT GAGCCATCTC TCAGCCCTCT AAAATATTTC
  TTTAAAAAAA GAATAGGAAA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss146121750	ENSMUSSNP6038832	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs52294743					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84132373 () rs orientation: forward

Symbol	Name	Function Class
Gm41637	predicted gene, 41637	581 bp downstream
Rr531870	regulatory region 531870	815 bp distal