rs52303501 SNP Detail

Summary

• ID
  rs52303501
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:96478655 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AGAGAGAGAG GAAGAAAGAA AGAAGCAAGA AAGGAAAGAG
  GAAAGAGAGA GAGGGAGAGA GAGGAAGAAG AAGGAGAGGA GGAGGAGAGA GGAAGGGAGG
  R
  AGGGAGGGAG GAAGGGAGGG AGGGAGGGAG GAAGGAAAAA AGGTGAGACA ATTTAGAAGT
  AAAAGCACTT GCCACCTGAG TCTGGTGCCA TGAGTTCAAT C                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J	MSM/Ms
ss135516985	ENSMUSSNP2786683	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J	MSM/Ms
rs52303501					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:96478655 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13568	CpG island 13568	1324 bp distal
Rr581320	regulatory region 581320	896 bp distal
Rr581321	regulatory region 581321	255 bp distal
Rr581322	regulatory region 581322	68 bp proximal