rs52304983 SNP Detail

Summary

• ID
  rs52304983
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  128
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:122295125 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TCTGCTACTT CCAGCACCAT TACAGGTGTT AAAGTCTAAA
  TTCCAACACC CTGAGAATGT GTGTAAAGGA AATCAATCAA TCAATCAATC AATCAGTCAA
  W
  CAAACAAACA AACAAACAAA ATAAAGAGGT CAAATGCATG GACCAGAATC TAAGAGGCAG
  GTGCTGATGC CTTCTTTAAG AAAAGATGAC TGGGACACAA A                    
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147010212	ENSMUSSNP6106295	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs52304983					SNP	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:122295125 () rs orientation: forward

Symbol	Name	Function Class
Gm63354	predicted gene, 63354	21 bp downstream
Gm63496	predicted gene, 63496	436 bp downstream
Rr498317	regulatory region 498317	127 bp proximal
Rr498318	regulatory region 498318	341 bp proximal
Tssr127312	transcription start site region 127312	625 bp upstream
Tssr130315	transcription start site region 130315	349 bp downstream